• *Search*: Multivariate Statistical Machine Learning Methods for Genomic Prediction

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Multivariate Statistical Machine Learning Methods for Genomic Prediction
Montesinos López, Osval Antonio ; Montesinos López, Abelardo ; Crossa, José

open access Statistical learning Bayesian regression Deep learning Non linear regression Plant breeding …
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2

Deep learning and genomic best linear unbiased prediction integration: An approach to identify potential nonlinear genetic relationships between traits
Shokor, F. ; Croiseau, P. ; Gangloff, H. ; et al.
In Journal of Dairy Science June 2025 108(6):6174-6189

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A Comparison of Three Machine Learning Methods for Multivariate Genomic Prediction Using the Sparse Kernels Method (SKM) Library.
Montesinos-López OA ; Montesinos-López A ; Cano-Paez B ; et al.
Publisher: MDPI Country of Publication: Switzerland NLM ID: 101551097 Publication Model: Electronic Cited Medium: Internet ISSN: 2073-4425 (Electronic) Linking ISSN: 20734425 NLM ISO Abbreviation: Genes (Basel) Subsets: MEDLINE

Plant Breeding methods Machine Learning Phenotype Genomics methods Genome
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4

Effectiveness of low-density high-throughput marker platform and easy-to-measure traits for genomic prediction of biomass yield in oat (Avena sativa L.).
Adewale SA ; Babar MA ; Jarquin D ; et al.
Publisher: Crop Science Society of America Country of Publication: United States NLM ID: 101273919 Publication Model: Print Cited Medium: Internet ISSN: 1940-3372 (Electronic) Linking ISSN: 19403372 NLM ISO Abbreviation: Plant Genome Subsets: MEDLINE

Polymorphism, Single Nuc... Plant Breeding Genetic Markers Genotype Phenotype Avena genetics …
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5

Enhancing genomic prediction with Stacking Ensemble Learning in Arabica Coffee
Moyses Nascimento ; Ana Carolina Campana Nascimento ; Camila Ferreira Azevedo ; et al.
Frontiers in Plant Science, Vol 15 (2024)

statistical and machine... prediction accuracy plant breeding ensemble methods GBLUP Plant culture …
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6

Genomic prediction through machine learning and neural networks for traits with epistasis
Costa, Weverton Gomes da ; Celeri, Maurício de Oliveira ; Barbosa, Ivan de Paiva ; et al.
In Computational and Structural Biotechnology Journal 2022 20:5490-5499

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POS0591 NOVEL PREDICTION MODEL FOR RAPID STRUCTURAL PROGRESSION PHENOTYPE IN KNEE OSTEOARTHRITIS PATIENTS USING MACHINE LEARNING
Gonzalez-Hernandez, M.F. ; Rego-Perez, I. ; Rodríguez-Valle, I. ; et al.
In Annals of the Rheumatic Diseases June 2025 84 Supplement 1:789-790

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8

Integrative multi‐omics approaches identify molecular pathways and improve Alzheimer's disease risk prediction.
Venkatesh, Rasika ; Cardone, Katie M. ; Bradford, Yuki ; et al.
Alzheimer's & Dementia: The Journal of the Alzheimer's Association. Nov2025, Vol. 21 Issue 11, p1-19. 19p.

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9

Artificial Neural Networks and Deep Learning for Genomic Prediction of Binary, Ordinal, and Mixed Outcomes
Montesinos López, Osval Antonio ; Montesinos López, Abelardo ; Crossa, Jose ; et al.
Multivariate Statistical Machine Learning Methods for Genomic Prediction ; page 477-532 ; ISBN 9783030890094 9783030890100

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10

General Elements of Genomic Selection and Statistical Learning
Montesinos López, Osval Antonio ; Montesinos López, Abelardo ; Crossa, Jose ; et al.
Multivariate Statistical Machine Learning Methods for Genomic Prediction ; page 1-34 ; ISBN 9783030890094 9783030890100

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11

rfPhen2Gen: A machine learning based association study of brain imaging phenotypes to genotypes
Malik, Muhammad Ammar ; Lundervold, Alexander S. ; Michoel, Tom

Quantitative Biology - G... Computer Science - Machi...
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12

Artificial Neural Networks and Deep Learning for Genomic Prediction of Continuous Outcomes
Montesinos López, Osval Antonio ; Montesinos López, Abelardo ; Crossa, Jose ; et al.
Multivariate Statistical Machine Learning Methods for Genomic Prediction ; page 427-476 ; ISBN 9783030890094 9783030890100

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13

Comprehensive Study of Existing Prediction Models for Depression in Women.
Genomics & Genetics Weekly; 5/9/2025, p195-195, 1p

PREDICTION models MENTAL depression MACHINE learning STATISTICAL bias EARLY diagnosis DIAGNOSIS …
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14

Accuracies of genomic predictions for disease resistance of striped catfish to Edwardsiella ictaluri using artificial intelligence algorithms
Vu, Nguyen Thanh ; Phuc, Tran Huu ; Oanh, Kim Thi Phuong ; et al.
G3: Genes, Genomes, Genetics. January, 2022, Vol. 21 Issue 1

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15

Development of Clinical-Radiomics Nomogram for Predicting Post-Surgery Functional Improvement in High-Grade Glioma Patients.
Ius, Tamara ; Polano, Maurizio ; Dal Bo, Michele ; et al.
Cancers. Mar2025, Vol. 17 Issue 5, p758. 17p.

PREOPERATIVE period STATISTICAL models WORLD Wide Web GLIOMAS HUMAN services programs THREE-dimensional imagin... …
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16

A novel stemness-related lncRNA signature predicts prognosis, immune infiltration and drug sensitivity of clear cell renal cell carcinoma
Liu, Jia ; Yao, Lin ; Yang, Yong ; et al.
Journal of Translational Medicine. February 27, 2025, Vol. 23 Issue 1

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17

Predicting cell invasion in breast tumor microenvironment from radiological imaging phenotypes.
Arefan D ; Hausler RM ; Sumkin JH ; et al.
Publisher: BioMed Central Country of Publication: England NLM ID: 100967800 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2407 (Electronic) Linking ISSN: 14712407 NLM ISO Abbreviation: BMC Cancer Subsets: MEDLINE

Female Humans Middle Aged Neoplasm Invasiveness Phenotype Retrospective Studies …
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18

Random Forest for Genomic Prediction
Montesinos López, Osval Antonio ; Montesinos López, Abelardo ; Crossa, Jose ; et al.
Multivariate Statistical Machine Learning Methods for Genomic Prediction ; page 633-681 ; ISBN 9783030890094 9783030890100

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19

Elements for Building Supervised Statistical Machine Learning Models
Montesinos López, Osval Antonio ; Montesinos López, Abelardo ; Crossa, Jose ; et al.
Multivariate Statistical Machine Learning Methods for Genomic Prediction ; page 71-108 ; ISBN 9783030890094 9783030890100

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20

Multivariate Analysis of RNA Chemistry Marks Uncovers Epitranscriptomics-Based Biomarker Signature for Adult Diffuse Glioma Diagnostics.
Relier S ; Amalric A ; Attina A ; et al.
Publisher: American Chemical Society Country of Publication: United States NLM ID: 0370536 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-6882 (Electronic) Linking ISSN: 00032700 NLM ISO Abbreviation: Anal Chem Subsets: MEDLINE

Metabolomics methods Proteomics methods Biomarkers Humans Multivariate Analysis Glioma diagnosis …
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