Treffer: Molreac-Oxi: An end-to-end deep learning-quantum chemistry platform for •OH reactivity (kOH), pathways, and active-site insight.
Original Publication: New York, Academic Press.
0 (Environmental Pollutants)
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To address the long-standing challenge of efficiently evaluating reaction rate constants (k<subscript>OH</subscript>) for pollutant-hydroxyl radical (•OH) systems in environmental pollution control, a hybrid meta-model framework is introduced that fuses deep pretrained models with traditional machine learning, together with an integrated platform that unifies prediction, mechanistic inference, and online analysis. From DFT-optimized structures, multidimensional quantum-chemical descriptors were extracted for 968 pollutants, and a large-scale pretrained 3D molecular model (Uni-Mol) was fine-tuned. The fine-tuned Uni-Mol model was stacked alongside first-layer learners-Random Forest, Gradient Boosting, XGBoost, LightGBM, and CatBoost-whose outputs were fused by a regularized linear meta-learner to estimate k<subscript>OH</subscript>. The stacked-ensemble attains R<sup>2</sup> = 0.806 with a lower MAE than any single learner, and parity plots and residual diagnostics for log<subscript>10</subscript>(k<subscript>OH</subscript>) indicate limited bias across major chemical classes. Interpretability is enhanced with SHAP (SHapley Additive exPlanations) and conditional, correlation-aware effect estimates; where appropriate, bootstrap-supported thresholds are reported to avoid over-interpreting collinear descriptors. To compensate for the limited PES (potential-energy-surface) resolution of static structure-property models, a PES-Learn model trained on 72,502 organic pollutants is coupled to a nanoreactor MD workflow so that mechanism-level hypotheses can be generated at near-DFT fidelity and orders-of-magnitude lower cost; on a GPU, inference achieves speedups of up to ∼3.1 × 10<sup>4</sup> over conventional DFT. These models and CDFT analysis are encapsulated in an online platform (https://www.bohrium.com/apps/molreac-oxi), providing a closed-loop workflow from rapid batch screening to reaction-pathway and active-site analysis.
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Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.